read_prefix = "/data/MIMIC3/"
res_patient_subgroup_prefix = "/data/liu/adverse_events/patient_subgroup"
## DRUG-ADE IN SIDER4, !!SIDER HAVE DUPLICATED RECORDS
sideffect_prefix = '/data/liu/adverse_events'
# output_prefix="/data/liu/mimic3/CLAMP_NER/single_drug_analysis/%s/cluster"
singledrug_prefix="/data/liu/mimic3/CLAMP_NER/single_drug_analysis"
singledrug_feature_prefix="/data/liu/mimic3/CLAMP_NER/single_drug_analysis/FEATURE/"
singledrug_featurepreprocess_prefix="/data/liu/mimic3/CLAMP_NER/single_drug_analysis/FEATURE/PRE_PROCESS"
clamp_input_prefix="/data/liu/mimic3/CLAMP_NER/input/"
clamp_output_prefix = "/data/liu/mimic3/CLAMP_NER/ner-attribute/output"
clamp_rule_benchmark = "/data/liu/mimic3/CLAMP_NER/input/RULE_BENCHMARK"
mapping_prefix = "/data/liu/mimic3/MAPPING/"
processed_map_prefix="/data/liu/mimic3/MAPPING/PROCESSED/"
concat_clamp_prefix="/data/liu/mimic3/CLAMP_NER/ner-attribute/output/CONCAT_Results"
term_path="/data/liu/mimic3/MAPPING/TERMINOLOGIES"
dis_sider_intersection_path="/data/liu/mimic3/CLAMP_NER/single_drug_analysis/CONCAT_RESULTS/DISEASE_SIDER_INTERSECTION"
product_ndc_file_path_prefix='/data/liu/mimic3/MAPPING/RAR/ndctext'
n2c2_data_prefix="/data/liu/mimic3/N2C2"