Hugging Face's logo

Spaces:
DataQuests
/
DeepCritical
Running

App Files Community
4
DeepCritical / src

Commit History

adds the initial iterative and deep research workflows
731a241
unverified

Joseph Pollack commited on

fix: update references to Europe PMC in examples and documentation
9d21bf8

VibecoderMcSwaggins commited on

feat(search): implement ClinicalTrials.gov filtering (Phase 03)
d55440b

VibecoderMcSwaggins commited on

feat(search): implement PubMed query preprocessing (Phase 02)
e502f0d

VibecoderMcSwaggins commited on

refactor(tools): replace BioRxiv with Europe PMC (Phase 01)
2f8ae1f

VibecoderMcSwaggins commited on

fix: exclude reference_repos from mypy and cleanup
0a480cb

VibecoderMcSwaggins commited on

refactor: enhance Gradio UI for improved user experience
291b9e6

VibecoderMcSwaggins commited on

fix: address CodeRabbit feedback and P0 blockers
f985224

VibecoderMcSwaggins commited on

docs: add P0 blockers documentation for Magentic mode implementation
c2f7da2

VibecoderMcSwaggins commited on

feat: implement Magentic ChatAgent pattern with semantic state management
645a051

VibecoderMcSwaggins commited on

feat: implement HFInferenceJudgeHandler for free-tier AI analysis
7fab6d4

VibecoderMcSwaggins commited on

fix: wire EmbeddingService to simple orchestrator + improve search quality
2e4a760

VibecoderMcSwaggins commited on

fix: disable ssr_mode to resolve intermittent gradio hydration issues
420d8ba

VibecoderMcSwaggins commited on

fix: resolve Gradio UI cutoff by removing fill_height=True and restructuring layout
87de5ef

VibecoderMcSwaggins commited on

fix: move title/description into ChatInterface for proper HF Spaces layout
998d05d

VibecoderMcSwaggins commited on

fix: upgrade Gradio SDK to 6.0.1 and add fill_height for HF Spaces UI fix
f236de1

VibecoderMcSwaggins commited on

chore: clean up env config and upgrade model defaults
9e9bc6b

VibecoderMcSwaggins commited on

fix: use config settings for model names instead of hardcoded values
f5747b1
unverified

Claude commited on

feat: add demo mode warnings and BYOK (Bring Your Own Key) support
4d87419
unverified

Claude commited on

fix: upgrade Gradio to 5.32.0+ for MCP server support
1812a2a

VibecoderMcSwaggins commited on

feat: add smoke tests and fix Gradio 6.x compatibility
2bd9462

VibecoderMcSwaggins commited on

fix: Gradio examples format for additional_inputs
f66a862

VibecoderMcSwaggins commited on

fix: make ResearchReport.references optional with default
f882609

VibecoderMcSwaggins commited on

docs: sync AI agent context files and fix final nitpicks
8bac750

VibecoderMcSwaggins commited on

refactor: address CodeRabbit nitpick suggestions
901acc3

VibecoderMcSwaggins commited on

fix: address CodeRabbit review feedback for Phase 13
f32a2ca

VibecoderMcSwaggins commited on

fix: wire analyze_hypothesis MCP tool into Gradio app
521d97d

VibecoderMcSwaggins commited on

feat: implement phase 13 modal pipeline integration
7cc8b69

VibecoderMcSwaggins commited on

feat: enhance Gradio UI with MCP server support and new tool interfaces
10e234c

VibecoderMcSwaggins commited on

feat: add MCP tool wrappers for biomedical search tools
c114650

VibecoderMcSwaggins commited on

feat: Phase 11 bioRxiv Preprint Integration (#19)
e67c99f
unverified

VibecoderMcSwaggins commited on

refactor: centralize embedding configuration in Settings
20c7bad

VibecoderMcSwaggins commited on

fix(rag): address remaining CodeRabbit feedback
2f0030b

VibecoderMcSwaggins commited on

refactor: address CodeRabbit review feedback for Mario integration
cbd94a4

VibecoderMcSwaggins commited on

fix(rag): use get_content() for BaseNode compatibility
3f90da8

VibecoderMcSwaggins commited on

fix(rag): apply lazy imports and use centralized config
055a3a7

VibecoderMcSwaggins commited on

feat: Integrate Mario's Modal code execution + LlamaIndex RAG
3aa91e9

VibecoderMcSwaggins Mario commited on

refactor: address CodeRabbit nitpicks for Phase 10
1bc9785

VibecoderMcSwaggins commited on

feat: Implement Phase 10 (ClinicalTrials.gov) with requests
4e2ccbf

VibecoderMcSwaggins commited on

feat: Complete Phase 9 Source Cleanup (Remove WebTool) (#14)
cd004e1

VibecoderMcSwaggins commited on

fix(report): add explicit JSON structure guidance in prompt
d01e70d

VibecoderMcSwaggins commited on

fix: address all CodeRabbit Phase 8 review feedback
f1e4e5b

VibecoderMcSwaggins commited on

fix: apply lazy init pattern and pydantic-ai fixes to ReportAgent (#12)
3139749

VibecoderMcSwaggins commited on

fix: address CodeRabbit Phase 7 review feedback
bc74531

VibecoderMcSwaggins commited on