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Update app.py
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app.py
CHANGED
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@@ -109,18 +109,26 @@ def predictmic(sequence):
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# Combined Output as Single String
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def full_prediction(sequence):
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features = extract_features(sequence)
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if isinstance(features, str):
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return features
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prediction = model.predict(features)[0]
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probabilities = model.predict_proba(features)[0]
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amp_result = "Antimicrobial Peptide (AMP)" if prediction == 0 else "Non-AMP"
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confidence = round(probabilities[0 if prediction == 0 else 1] * 100, 2)
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result = f"Prediction: {amp_result}\nConfidence: {confidence}%\n
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return result
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# Gradio Interface (Single Label Output)
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iface = gr.Interface(
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fn=full_prediction,
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# Combined Output as Single String
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def full_prediction(sequence):
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features = extract_features(sequence)
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if isinstance(features, str): # error message returned
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return features
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prediction = model.predict(features)[0]
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probabilities = model.predict_proba(features)[0]
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amp_result = "Antimicrobial Peptide (AMP)" if prediction == 0 else "Non-AMP"
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confidence = round(probabilities[0 if prediction == 0 else 1] * 100, 2)
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result = f"Prediction: {amp_result}\nConfidence: {confidence}%\n"
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if prediction == 0: # only predict MIC if AMP
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mic_values = predictmic(sequence)
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result += "\nPredicted MIC Values (µM):\n"
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for organism, mic in mic_values.items():
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result += f"- {organism}: {mic}\n"
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else:
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result += "\nMIC prediction is not available because sequence is Non-AMP."
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return result
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# Gradio Interface (Single Label Output)
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iface = gr.Interface(
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fn=full_prediction,
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